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searching for Sequence motif 129 found (211 total)

PRDM9 (2,017 words) [view diff] exact match in snippet view article find links to article

positioning recombination hotspots during meiosis by binding a DNA sequence motif encoded in its zinc finger domain. PRDM9 is the only speciation gene

Condensation domain (125 words) [view diff] exact match in snippet view article find links to article

domain (pp-binding). It has been shown that mutations in the HHXXXDG sequence motif in this domain abolish activity suggesting this is part of the active

Motif description (126 words) [view diff] no match in snippet view article find links to article

the most important elements, the essential aspects of the movement sequence. Motif description is often used as an alternative to Labanotation when information

Phytase (2,938 words) [view diff] exact match in snippet view article find links to article

plants. All members of this class of phytase share a common active site sequence motif (Arg-His-Gly-X-Arg-X-Pro) and have a two-step mechanism that hydrolyzes

CSRP2 (629 words) [view diff] exact match in snippet view article find links to article

differentiation. CRP2 contains two copies of the cysteine-rich amino acid sequence motif (LIM) with putative zinc-binding activity, and may be involved in regulating

ZNF331 (446 words) [view diff] exact match in snippet view article find links to article

diverse functions. The zinc finger domain is a conserved amino acid sequence motif containing 2 specifically positioned cysteines and 2 histidines that

Satellite DNA (1,740 words) [view diff] exact match in snippet view article find links to article

of a GC-rich satellite band consisting of a ~2100 bp "repeat unit" sequence motif called RU. The RU was arranged in long tandem arrays with approximately

LSM6 (523 words) [view diff] exact match in snippet view article find links to article

protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length

LSM4 (726 words) [view diff] exact match in snippet view article find links to article

protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length

NUDT2 (832 words) [view diff] exact match in snippet view article find links to article

hydrolase family. The gene product possesses a modification of the MutT sequence motif found in certain nucleotide pyrophosphatases. The enzyme asymmetrically

WH1 domain (903 words) [view diff] exact match in snippet view article find links to article

domain in their N-terminal region, which seems to bind a different sequence motif present in the C-terminal part of RanGTP protein. Tertiary structure

FLYWCH zinc finger (267 words) [view diff] exact match in snippet view article find links to article

characterised by five conserved hydrophobic residues, containing the conserved sequence motif: F/Y-X(n)-L-X(n)-F/Y-X(n)-WXCX(6-12)CX(17-22)HXH where X indicates any

Protein function prediction (4,123 words) [view diff] no match in snippet view article find links to article

Protein function prediction methods are techniques that bioinformatics researchers use to assign biological or biochemical roles to proteins. These proteins

Protein (11,210 words) [view diff] no match in snippet view article find links to article

Proteins are large biomolecules and macromolecules that comprise one or more long chains of amino acid residues. Proteins perform a vast array of functions

LTBP1 (gene) (1,023 words) [view diff] exact match in snippet view article

binding protein 1". Saharinen, J; Keski-Oja J (August 2000). "Specific sequence motif of 8-Cys repeats of TGF-beta binding proteins, LTBPs, creates a hydrophobic

FYVE domain (445 words) [view diff] exact match in snippet view article find links to article

cysteines. Many members of this family also include two histidines in a sequence motif: R+HHC+XCG, where + represents a charged residue and X any residue The

FUT8 (994 words) [view diff] exact match in snippet view article find links to article

S2CID 85305954. Takahashi T, Ikeda Y, Tateishi A, et al. (2000). "A sequence motif involved in the donor substrate binding by alpha1,6-fucosyltransferase:

Chilodonella uncinata (1,407 words) [view diff] exact match in snippet view article find links to article

however, C. uncinata, like other ciliate species, show a conserved IES sequence motif within a species. It is unknown if IES sequences have a function in

OBPgp279 (1,163 words) [view diff] exact match in snippet view article find links to article

hydrolase family 19 (GH19) due to the presence of a conserved sequence motif (general sequence motif = [FHY]-G-R-G-[AP]-ζ-Q-[IL]-[ST]-[FHYW]-[HN]-[FY]-[NY],

GRLF1 (819 words) [view diff] exact match in snippet view article find links to article

efficacy of GRLF1 is regulated through its interaction with specific sequence motif. The level of expression is regulated by glucocorticoids. GRCh38: Ensembl

HIVEP1 (852 words) [view diff] exact match in snippet view article find links to article

A-crystallin gene: isolation of a cDNA encoding a protein that binds to a cis sequence motif shared with the major histocompatibility complex class I gene and other

Kir2.1 (1,491 words) [view diff] exact match in snippet view article find links to article

S2CID 14452157. Stockklausner C, Ludwig J, Ruppersberg JP, Klöcker N (2001). "A sequence motif responsible for ER export and surface expression of Kir2.0 inward rectifier

RING finger domain (1,202 words) [view diff] exact match in snippet view article find links to article

Freemont PS, Hanson IM, Trowsdale J (1991). "A novel cysteine-rich sequence motif". Cell. 64 (3): 483–4. doi:10.1016/0092-8674(91)90229-R. PMID 1991318

RANBP2 (2,042 words) [view diff] exact match in snippet view article find links to article

identification by expression cloning and characterization of a conserved sequence motif". Proceedings of the National Academy of Sciences of the United States

Histone variants (1,457 words) [view diff] exact match in snippet view article find links to article

characterized. H2A.X is the most common H2A variant, with the defining sequence motif ‘SQ(E/D)Φ’ (where Φ-represents a hydrophobic residue, usually Tyr in

OFD1 (923 words) [view diff] exact match in snippet view article find links to article

1086/318802. PMC 1274470. PMID 11179005. Emes RD, Ponting CP (2002). "A new sequence motif linking lissencephaly, Treacher Collins and oral-facial-digital type

Alternative oxidase (1,317 words) [view diff] exact match in snippet view article find links to article

predicted to contain a coupled diiron center on the basis of a conserved sequence motif consisting of the proposed iron ligands, four glutamate and two histidine

Temple F. Smith (872 words) [view diff] exact match in snippet view article find links to article

Biol Evol. 1993 Nov;10(6):1327–42. Figge J, Smith TF. Cell division sequence motif. Nature 334 (6178), 109 (14 July 1988) |pmid=3290690 |doi=10.1038/334109a0

Disintegrin (1,167 words) [view diff] exact match in snippet view article find links to article

haemostasis. Disintegrins contain an RGD (Arg-Gly-Asp) or KGD (Lys-Gly-Asp) sequence motif that binds specifically to integrin IIb-IIIa receptors on the platelet

ATPase (2,143 words) [view diff] exact match in snippet view article find links to article

gov/ToxProfiles/tp132.pdf p. 73 The Walker motifs are a telltale protein sequence motif for nucleotide binding and hydrolysis. Beyond this broad function, the

CA11 (718 words) [view diff] exact match in snippet view article find links to article

conserved, "acatalytic" carbonic anhydrase-related protein XI contains a sequence motif present in the neuropeptide sauvagine: the human CA-RP XI gene (CA11)

Motifs targeted by APC/C (750 words) [view diff] exact match in snippet view article find links to article

unstructured regions of the substrates. Destruction Box (D Box) The D box is a sequence motif found in many targets of the APC with the consensus RxxLxxxxN amino

HslVU (1,223 words) [view diff] exact match in snippet view article find links to article

expression. This structure contributes to mRNA stability. A four-amino acid sequence motif - GYVG, glycine-tyrosine-valine-glycine - conserved in hslU ATPases

Tetratricopeptide repeat (1,220 words) [view diff] exact match in snippet view article find links to article

by X-ray crystallography by Das and colleagues showed that the TPR sequence motif was composed of a pair of antiparallel alpha helices. The PP5 structure

KCNK9 (1,563 words) [view diff] exact match in snippet view article find links to article

Schlichthörl G, Schubert A, Daut J, Preisig-Müller R (2007). "A di-acidic sequence motif enhances the surface expression of the potassium channel TASK-3". Traffic

Rossmann fold (1,373 words) [view diff] exact match in snippet view article find links to article

revealed that from prokaryotes, through metazoa and up to primates the sequence motif difference from that of most FAD and NAD-binding sites is strictly conserved

CRIPT (606 words) [view diff] exact match in snippet view article find links to article

propionate receptor subunit is determined by a novel sequence motif". J. Biol. Chem. 277 (35): 31484–90. doi:10.1074/jbc.M204354200. PMID 12070168

SV40 large T antigen (1,413 words) [view diff] exact match in snippet view article find links to article

3642. PMID 10764582. Figge J, Smith TF (14 July 1988). "Cell division sequence motif". Nature. 334 (6178): 109. doi:10.1038/334109a0. PMID 3290690. Figge

Synaptotagmin (2,135 words) [view diff] exact match in snippet view article find links to article

long-term potentiation. The C2 domain is a widely occurring conserved sequence motif of 130-140 amino acid residues, which was first defined as the second

TUBGCP4 (340 words) [view diff] exact match in snippet view article find links to article

(May 2002). "Direct binding of NuMA to tubulin is mediated by a novel sequence motif in the tail domain that bundles and stabilizes microtubules". Journal

UBAP2 (493 words) [view diff] exact match in snippet view article find links to article

Library of Medicine. Hofmann K, Bucher P (May 1996). "The UBA domain: a sequence motif present in multiple enzyme classes of the ubiquitination pathway". Trends

M2 proton channel (2,294 words) [view diff] exact match in snippet view article find links to article

sequence homology between influenza AM2 and BM2 except for the HXXXW sequence motif in the TMS that is essential for channel function. Its proton conductance

Mitochondrial dicarboxylate carrier (1,979 words) [view diff] exact match in snippet view article find links to article

of about 100 amino acid residues, each of which contains a conserved sequence motif. These three tandem sequences fold into two anti-parallel transmembrane

Glypiation (738 words) [view diff] exact match in snippet view article find links to article

does not have a consensus sequence but instead recognizes a C-terminal sequence motif that enables it to covalently attach a GPI anchor to an amino acid in

LPXTGase (296 words) [view diff] exact match in snippet view article find links to article

of a unique glycosylated anchor endopeptidase that cleaves the LPXTG sequence motif of cell surface proteins of Gram-positive bacteria". Journal of Biological

LTBP3 (765 words) [view diff] case mismatch in snippet view article find links to article

PMID 9620332. S2CID 41314097. Saharinen J, Keski-Oja J (2000). "Specific Sequence Motif of 8-Cys Repeats of TGF-β Binding Proteins, LTBPs, Creates a Hydrophobic

RsaOG (364 words) [view diff] exact match in snippet view article find links to article

for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation". Nucleic Acids Res. 37 (21): 7239–7257. doi:10.1093/nar/gkp668

Ankyrin repeat (1,393 words) [view diff] exact match in snippet view article find links to article

commonly have a Schellman loop at their N-terminus. The ankyrin-repeat sequence motif has been studied using multiple sequence alignment to determine conserved

Beta sheet (3,100 words) [view diff] exact match in snippet view article find links to article

structure, using the backbone and the Asp side chain oxygens of a GGXGXD sequence motif. This fold is called a β-roll in the SCOP classification. Some proteins

Beta sheet (3,100 words) [view diff] exact match in snippet view article find links to article

structure, using the backbone and the Asp side chain oxygens of a GGXGXD sequence motif. This fold is called a β-roll in the SCOP classification. Some proteins

Multiple endocrine neoplasia (2,138 words) [view diff] exact match in snippet view article find links to article

not reveal homologies to any other known human or mammalian protein, sequence motif, or signal peptide. The absence of significant homology to any other

WPP domain (238 words) [view diff] exact match in snippet view article find links to article

A multiple sequence alignment of proteins containing a WPP domain showing the conserved WPP sequence motif to the left.

LSM1 (802 words) [view diff] exact match in snippet view article find links to article

the Sm protein family (see SNRPD2). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length

Plectin (2,700 words) [view diff] exact match in snippet view article find links to article

(Sep 1996). "Basic amino acid residue cluster within nuclear targeting sequence motif is essential for cytoplasmic plectin-vimentin network junctions". The

LSM7 (789 words) [view diff] exact match in snippet view article find links to article

protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length

Dz13 (1,060 words) [view diff] exact match in snippet view article find links to article

G-rich oligode-oxynucleotides: putative protein targets and required sequence motif. Nucleic Acids Res. 35, 4562–4572. Gozar, M.M. et al (2008) Dz13, a

Protein phosphatase 1 (2,042 words) [view diff] exact match in snippet view article find links to article

subunit is always paired with one or more regulatory subunits. The core sequence motif for binding to the catalytic subunit is "RVxF", but additional motifs

LSM3 (876 words) [view diff] exact match in snippet view article find links to article

protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length

IWS1 (609 words) [view diff] exact match in snippet view article find links to article

PMC 1459365. PMID 16565220. Ling Y, Smith AJ, Morgan GT (2006). "A sequence motif conserved in diverse nuclear proteins identifies a protein interaction

Multisite-specific tRNA:(cytosine-C5)-methyltransferase (316 words) [view diff] exact match in snippet view article

Husson C, Auxilien S, Golinelli-Pimpaneau B (July 2007). "Cysteine of sequence motif VI is essential for nucleophilic catalysis by yeast tRNA m5C methyltransferase"

Treacle protein (1,465 words) [view diff] exact match in snippet view article find links to article

3061. PMC 14975. PMID 10982400. Emes RD, Ponting CP (2002). "A new sequence motif linking lissencephaly, Treacher Collins and oral-facial-digital type

HindIII (1,045 words) [view diff] exact match in snippet view article find links to article

such as EcoRI, BamHI, and BglII. These enzymes contain the amino acid sequence motif PD-(D/E)XK to coordinate Mg2+, a cation required to cleave DNA in most

IPO8 (604 words) [view diff] exact match in snippet view article find links to article

member of a class of approximately 20 potential Ran targets that share a sequence motif related to the Ran-binding site of importin-beta. This protein binds

MeuKTX (623 words) [view diff] exact match in snippet view article find links to article

These members share 68-97% sequence similarity and contain a specific sequence motif - AGMRFGKC. Typically, α-KTxs affect voltage-gated potassium channels

Mannose receptor (3,688 words) [view diff] exact match in snippet view article find links to article

receptor. The presence of a di-aromatic FENTLY (Phe-Glu-Asn-Thr-Leu-Tyr) sequence motif in the cytoplasmic tail of the receptor is vital for its clathrin-mediated

TGF beta 1 (2,290 words) [view diff] exact match in snippet view article find links to article

31455. PMID 9813058. Saharinen J, Keski-Oja J (August 2000). "Specific sequence motif of 8-Cys repeats of TGF-beta binding proteins, LTBPs, creates a hydrophobic

DLG3 (1,389 words) [view diff] exact match in snippet view article find links to article

propionate receptor subunit is determined by a novel sequence motif". J. Biol. Chem. 277 (35): 31484–90. doi:10.1074/jbc.M204354200. PMID 12070168

SAMD4A (404 words) [view diff] exact match in snippet view article find links to article

that functions as a posttranscriptional regulator by binding to an RNA sequence motif known as the Smaug recognition element, which was named after the Drosophila

LTBP2 (831 words) [view diff] exact match in snippet view article find links to article

32.20669. PMID 9685426. Saharinen J, Keski-Oja J (2000). "Specific sequence motif of 8-Cys repeats of TGF-beta binding proteins, LTBPs, creates a hydrophobic

List of sequence alignment software (2,355 words) [view diff] exact match in snippet view article find links to article

statistics Protein Genome Magician Software for ultra fast local DNA sequence motif search and pairwise alignment for NGS data (FASTA, FASTQ). DNA Hepperle

Nuclear mitotic apparatus protein 1 (1,140 words) [view diff] exact match in snippet view article find links to article

A (2002). "Direct binding of NuMA to tubulin is mediated by a novel sequence motif in the tail domain that bundles and stabilizes microtubules". J. Cell

HOMER1 (1,685 words) [view diff] exact match in snippet view article find links to article

postsynaptic density. EVH1 domain interacts with PPXXF motif. This sequence motif exists in group 1 metabotrophic glutamate receptor (mGluR1 and mGluR5)

HINT2 (998 words) [view diff] exact match in snippet view article find links to article

histidine triad (HIT) family, HINT2 contains a conserved histidine and HIT sequence motif (His-X-His-X-His-X-X), and the latter two histidines contribute to a

IRGD (551 words) [view diff] exact match in snippet view article find links to article

homes and penetrates tumors through a 3-step process: First, the RGD sequence motif mediates binding to αVβ3 and αVβ5 integrins that are expressed on tumor

SRNA-Xcc1 (596 words) [view diff] exact match in snippet view article find links to article

based on the multiple alignment using RNAalifold program. The conserved sequence motif ‘AUACAAnACCC’ was boxed. The phylogenetic tree of sRNA-Xcc1 homologs

Reverse engineering (6,896 words) [view diff] exact match in snippet view article find links to article

related although no causation can be simply inferred from coexpression. Sequence motif methods analyze gene promoters to find specific transcription factor

Epstein–Barr virus stable intronic-sequence RNAs (1,104 words) [view diff] exact match in snippet view article find links to article

ebv-sisRNA-1 form a short hairpin loop that presents a Uridine-rich sequence motif (a possible platform for protein interactions) into the loop. The remainder

Rsa RNA (1,363 words) [view diff] exact match in snippet view article find links to article

for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation". Nucleic Acids Research. 37 (21): 7239–7257. doi:10

Mothers against decapentaplegic homolog 4 (3,464 words) [view diff] exact match in snippet view article find links to article

binds to the TPA-responsive gene promoter elements, which have the sequence motif TGAGTCAG. The first structure of SMAD4 bound to DNA was the complex

Bcl-2-interacting killer (1,379 words) [view diff] exact match in snippet view article find links to article

(Dec 1995). "Bik, a novel death-inducing protein shares a distinct sequence motif with Bcl-2 family proteins and interacts with viral and cellular survival-promoting

LSM2 (1,309 words) [view diff] exact match in snippet view article find links to article

protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length

ST motif (665 words) [view diff] exact match in snippet view article find links to article

22704. PMC 7610952. PMID 20310069. Suzuki, M (1989). "SPXX, a frequent sequence motif in gene regulatory proteins". Journal of Molecular Biology. 207 (1):

Mothers against decapentaplegic homolog 3 (4,177 words) [view diff] exact match in snippet view article find links to article

binds to the TPA-responsive gene promoter elements, which have the sequence motif TGAGTCAG. Transcriptional coregulators, such as WWTR1 (TAZ), interact

Gene prediction (3,527 words) [view diff] exact match in snippet view article find links to article

Busch A, Backofen R (2006). "Using RNA secondary structures to guide sequence motif finding towards single-stranded regions". Nucleic Acids Research. 34

MED26 (1,325 words) [view diff] exact match in snippet view article find links to article

1074/jbc.M002595200. PMID 10811649. Ling Y, Smith AJ, Morgan GT (2006). "A sequence motif conserved in diverse nuclear proteins identifies a protein interaction

Second Generation Multiplex Plus (721 words) [view diff] exact match in snippet view article find links to article

observed in the SGM Plus loci Locus designation Chromosome location Common sequence motif Allele range Size range (bp) Dye label FGA 4q28 (TTTC)3TTTT TTCT (CTTT)n

ITGB1BP1 (1,167 words) [view diff] exact match in snippet view article find links to article

domain-associated protein, binds to a conserved and functionally important NPXY sequence motif of beta1 integrin". J Cell Biol. 138 (5): 1149–57. doi:10.1083/jcb.138

VAPA (1,892 words) [view diff] exact match in snippet view article find links to article

MSP-homologous part of VAPA is able to bind to the FFAT motif, a particular sequence motif shared by several lipid binding proteins including oxysterol-binding

TMEM125 (896 words) [view diff] exact match in snippet view article find links to article

(2002). "N-terminal N-myristoylation of proteins: refinement of the sequence motif and its taxon-specific differences". Journal of Molecular Biology. 317

Polyadenylation (7,095 words) [view diff] exact match in snippet view article find links to article

if the AAUAAA sequence is missing. The polyadenylation signal – the sequence motif recognised by the RNA cleavage complex – varies between groups of eukaryotes

Glycoside hydrolase family 19 (599 words) [view diff] exact match in snippet view article find links to article

about 220 to 230 amino acid residues. GH19 enzymes has a conserved sequence motif ([FHY]-G-R-G-[AP]-ζ-Q-[IL]-[ST]-[FHYW]-[HN]-[FY]-[NY], ζ= hydrophilic

Mitochondrial DNA (9,968 words) [view diff] exact match in snippet view article find links to article

within GC-skewed regions and in the close vicinity of the degenerate sequence motif YMMYMNNMMHM. Unlike nuclear DNA, which is inherited from both parents

C5orf49 (660 words) [view diff] exact match in snippet view article find links to article

domain DUF4541. Within this protein domain, there is a conserved KLHRDDR sequence motif and a single completely conserved residue Y that may be functionally

Visna-maedi virus (3,774 words) [view diff] exact match in snippet view article find links to article

Georgsson G, Ingvarsson S, Andrésson OS, Andrésdóttir V (2007). "Duplicated sequence motif in the long terminal repeat of maedi-visna virus extends cell tropism

Cyclin D (4,605 words) [view diff] exact match in snippet view article find links to article

Through close analysis of different Rb-docking helices, a consensus helix sequence motif was identified, which can be utilized to identify potential non-canonical

DLG1 (1,961 words) [view diff] exact match in snippet view article find links to article

propionate receptor subunit is determined by a novel sequence motif". The Journal of Biological Chemistry. 277 (35): 31484–90. doi:10.1074/jbc

Nuclear receptor (6,675 words) [view diff] exact match in snippet view article find links to article

coactivator protein, the so-called NR box containing the LXXLL amino acid sequence motif. Antagonists occupy the same ligand binding cavity of the nuclear receptor

DNA adenine methylase (1,844 words) [view diff] exact match in snippet view article find links to article

PMID 7897657. Kossykh VG, Schlagman SL, Hattman S (July 1993). "Conserved sequence motif DPPY in region IV of the phage T4 Dam DNA-[N-adenine]-methyltransferase

Selective estrogen receptor modulator (6,397 words) [view diff] exact match in snippet view article find links to article

coactivator protein, the so-called NR box containing the LXXLL amino acid sequence motif. Antagonists occupy the same ligand binding cavity of the nuclear receptor

Erkki Ruoslahti (1,433 words) [view diff] exact match in snippet view article find links to article

Having bound to tumor vessels the peptide is cleaved and an amino acid sequence motif named the C-end rule or CendR motif (pronounced "sender") is exposed

Nucleoid (17,198 words) [view diff] exact match in snippet view article find links to article

presence of a conserved sequence motif found in AT-rich regions. More importantly, the frequent occurrence of the sequence motif within an H-NS binding

Retinoschisin (1,783 words) [view diff] exact match in snippet view article find links to article

off before the protein becomes functional), and a highly conserved sequence motif called the discoidin domain which consists of 157 amino acids, important

Sweet potato leaf curl virus (2,300 words) [view diff] exact match in snippet view article find links to article

separated by an intergenic region (IR) which contains a conserved stem-loop sequence motif. Virus particles enter the host cell and then the uncoated viral genome

Transforming growth factor beta (8,485 words) [view diff] exact match in snippet view article find links to article

PMC 186672. PMID 12208849. Saharinen J, Keski-Oja J (August 2000). "Specific sequence motif of 8-Cys repeats of TGF-beta binding proteins, LTBPs, creates a hydrophobic

Protein structure prediction (8,971 words) [view diff] exact match in snippet view article find links to article

and that often is near the active site of the protein. Examples of sequence motif databases are the Prosite catalog and the Stanford Motifs Database.

Cobalamin riboswitch (2,350 words) [view diff] exact match in snippet view article find links to article

of binding CyCbl. Before proof of riboswitch function, a conserved sequence motif called the B12 box was identified that corresponds to a part of the

Antifreeze protein (6,239 words) [view diff] exact match in snippet view article find links to article

ice-binding surface. Unlike the other AFPs, there is not a singular sequence motif for the ice-binding site. AFP found from the metagenome of the ciliate

TGF beta Activation (2,412 words) [view diff] exact match in snippet view article find links to article

PMC 186672. PMID 12208849. Saharinen, J.; Keski-Oja, J. (2000). "Specific sequence motif of 8-Cys repeats of TGF-beta binding proteins, LTBPs, creates a hydrophobic

ZNF337 (2,715 words) [view diff] exact match in snippet view article find links to article

type - RING finger), and Zinc finger (MYM-type zinc finger with FCS sequence motif) all play different functions and roles. The secondary structure of

Paul M. Bingham (2,522 words) [view diff] exact match in snippet view article find links to article

regulators are a novel, ancient protein family sharing a highly conserved sequence motif with the prp21 family of constitutive splicing proteins". Nucleic Acids

Heterochromatin protein 1 (1,880 words) [view diff] exact match in snippet view article find links to article

Pearce J, Kothary R, Burton RD, Paro R, et al. (February 1991). "A sequence motif found in a Drosophila heterochromatin protein is conserved in animals

FADD (4,191 words) [view diff] case mismatch in snippet view article find links to article

Protein That Interacts with the Death Domain of Fas/APO1 Contains a Sequence Motif Related to the Death Domain". Journal of Biological Chemistry. 270 (14):

EIF4E (8,382 words) [view diff] exact match in snippet view article find links to article

(CACGTG E box repeats) in the promoter region of the eIF4E gene. This sequence motif is shared with other in vivo targets for myc and mutations in the E

Ball and chain inactivation (2,508 words) [view diff] exact match in snippet view article find links to article

identified as essential for inactivation. The initial residues have a sequence motif of phenylalanine, isoleucine and tryptophan without which inactivation

STARR-seq (1,616 words) [view diff] exact match in snippet view article find links to article

DL, Lung PY, Sui X, et al. (August 2021). "The native cistrome and sequence motif families of the maize ear". PLOS Genetics. 17 (8): e1009689. doi:10

Glossary of cellular and molecular biology (0–L) (24,805 words) [view diff] exact match in snippet view article

Contrast knockin. Kozak consensus sequence A highly conserved nucleic acid sequence motif which functions as the recognition site for the initiation of translation

RBFOX1 (3,549 words) [view diff] exact match in snippet view article find links to article

proteins. Rbfox1, and the related protein Rbfox2, bind the consensus RNA sequence motif (U)GCAUG within introns to exert their functions as alternative splicing

FAM203B (1,500 words) [view diff] exact match in snippet view article find links to article

Related to the HEAT domain, consists of a 40-amino-acid tandemly repeated sequence motif, and is thought to mediate protein-protein interactions. Several eukaryotic

FAM149A (1,841 words) [view diff] exact match in snippet view article find links to article

eukaryotic organisms and is made of 70 amino acids. There is a conserved HLR sequence motif found in DUF 3719. Below is an image showing the DUF3719 on FAM149A

Triple-stranded DNA (6,100 words) [view diff] exact match in snippet view article find links to article

tandem intramolecular triplexes of the H-DNA type and has a repetitive sequence motif (ACCCTCCCC)4. The mutated NSE was examined for transcriptional activity

UBXD8 (1,130 words) [view diff] exact match in snippet view article find links to article

PMID 12372427. Hofmann, Kay; Bucher, Philipp (May 1996). "The UBA domain: a sequence motif present in multiple enzyme classes of the ubiquitination pathway". Trends

Valosin-containing protein (5,868 words) [view diff] exact match in snippet view article find links to article

structure of ubiquitin. The VCP-interacting motif (VIM) is a linear sequence motif (RX5AAX2R) found in a number of VCP cofactors including gp78, SVIP (small

Trimeric autotransporter adhesin (3,947 words) [view diff] exact match in snippet view article find links to article

by the GIN domain. The GIN domain is a head domain named after its sequence motif GIN (Glycine-Isoleucine-Asparagine) motif. It has an all-beta structure

Rhomboid protease (4,629 words) [view diff] exact match in snippet view article find links to article

defined by two separable elements: the transmembrane domain and a primary sequence motif in or immediately adjacent to it. This recognition motif directs where

Vincent Fischetti (2,484 words) [view diff] exact match in snippet view article find links to article

anchored in the gram-positive bacterial cell wall, identifying the LPXTG sequence motif used as the anchoring signal. The lab discovered that this LPXTG motif

Death Domain database (2,089 words) [view diff] no match in snippet view article find links to article

between proteins -Manually curated data -Easy search options: protein, sequence, motif, article, IMEx, and pathBLAST Human Yeast Fruit Fly Many others

Jan Klein (4,880 words) [view diff] exact match in snippet view article find links to article

evolution. The hook-up seems to have arisen, when an identical short sequence motif arose by chance at both flanks of the initial C4-CYP21 doublet. Since

SLC46A3 (6,550 words) [view diff] exact match in snippet view article find links to article

present in metal-binding proteins and oxidoreductases. A sorting-signal sequence motif, YXXphi, is also found at Tyr246 - Phe249 (YMLF) and Tyr446 - Leu449

TMEM211 (9,001 words) [view diff] exact match in snippet view article find links to article

Jader M.; Kashiwabara, André Y.; Sanches, Danilo S. (December 2018). "Sequence motif finder using memetic algorithm". BMC Bioinformatics. 19 (1): 4. doi:10